PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.D00387.1.p
Common NameMIMGU_mgv1a021173mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 119aa    MW: 13156 Da    PI: 9.9753
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.D00387.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY51.12.7e-1661110360
                       -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                       D+y+WrKYGqK++kg +  r        gCp++k+v r++ed +++++tYege nh+k
  Migut.D00387.1.p  61 DEYSWRKYGQKPIKGDTIMR--------GCPSRKHVVRCSEDSSMLIVTYEGEQNHPK 110
                       9***************9977........7***************************85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-1849110IPR003657WRKY domain
PROSITE profilePS5081117.45454111IPR003657WRKY domain
SuperFamilySSF1182902.09E-1557110IPR003657WRKY domain
SMARTSM007745.5E-1659110IPR003657WRKY domain
PfamPF031061.3E-1161109IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MSSTRSFISS LSMGGSIANR NADQISYHHK RKCSRSVKCG DSKQGIKIPA TSNKLADIPP  60
DEYSWRKYGQ KPIKGDTIMR GCPSRKHVVR CSEDSSMLIV TYEGEQNHPK LPSQLIDT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-1347112275WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012835977.12e-76PREDICTED: probable WRKY transcription factor 21
SwissprotO043365e-45WRK21_ARATH; Probable WRKY transcription factor 21
TrEMBLA0A022S2D35e-84A0A022S2D3_ERYGU; Uncharacterized protein
STRINGVIT_07s0141g00680.t012e-48(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.13e-46WRKY DNA-binding protein 21